Things are progressing much faster than usual - this will be an epic week for paper-submitting!
The Research Associate submitted her manuscript about natural competence in E. coli a few days ago, to the Journal of Bacteriology. She's done a mass of work showing that a wide range of E. coli strains (including the full ECOR collection) are not naturally transformable even when their competence regulons are induced by artificial expression of Sxy from a high-copy plasmid. But a bit of transformation does happen if recombination functions are also artificially provided by inducing the lambda 'recombineering' genes. So the competence regulon does encode a functional DNA uptake machinery. We don't know why it's so inefficient compared to those of other bacteria, though we make a few suggestions.
The arseniclife analyses have all been replicated and the manuscript is almost ready for submission to Science as a Report. We're aiming for Monday - the grad student and his supervisor are still polishing up their figures.
After what seems like an eternity of wrestling with his DNA uptake specificity data, the analyses, and the interpretations, the post-doc and I now agree that we have an excellent manuscript that will be ready to submit to PNAS within a few days.
A manuscript by a visiting grad student from a few years ago is also going to be submitted within the next few days. It describes her investigations into competence of a relative of Haemophilus influenze, the poultry pathogen Gallibacterium anatis. We're listed as authors because some of the work was done in our lab, and because we've contributed quite a bit to the analysis and writing.
And finally, my article about how the teaching of introductory genetics needs to change is just about ready to send to PLoS Biology!
Field of Science
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The Even Earlier Discovery of Antibiotic Resistance2 days ago in Memoirs of a Defective Brain
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Religion is halfway between a fact and an opinion - according to kids and adults4 days ago in Epiphenom
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Bioengineers go retro to build a calculator from living cells4 days ago in The Allotrope
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A New Non-mammaliaform Eucynodont from the Ischigualasto Formation of Argentina1 week ago in Chinleana
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Chemistry, fluid dynamics and an awful radioactive mess1 week ago in The Curious Wavefunction
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Exploding expertise2 weeks ago in The Culture of Chemistry
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The Lure of the Obscure? Guest Post by Frank Stahl11 months ago in Sex, Genes & Evolution
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Finding a new translation factor, and verifying it with help from my experimental friends1 year ago in Protein Evolution and Other Musings
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The Large Picture Blog Has Moved1 year ago in The Large Picture Blog
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Lab Rat Moving House1 year ago in Life of a Lab Rat
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Goodbye FoS, thanks for all the laughs1 year ago in Disease Prone
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Branson getting into microbial diversity in the deep sea2 years ago in The Greenhouse
Not your typical science blog, but an 'open science' research blog. Watch me fumbling my way towards understanding how and why bacteria take up DNA, and getting distracted by other cool questions.
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There is one thing that fascinates me.
ReplyDeleteThe Research Associate, a postdoc ... - do those guys have names?
Of course. By not using their names I leave them a bit of privacy.
ReplyDelete